Experimental and Molecular Docking Study of 3′,4′,5′-Trimethoxychalcones Targeting Overexpressed Protein in HCT-116 Colon Cancer Cells

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Ade Danova, Piyanuch Wonganan, Elvira Hermawati, Fera Kurniadewi, Iqbal Musthapa, Warinthorn Chavasiri

2025 Jurnal Kimia Valensi Vol. 11 Issue 2 Article Cited by 0 SDG 3SDG 17 Quartile

Abstract

Cancer poses a substantial global health challenge. Colorectal cancer (CRC) is the second leading cause of cancer-related mortality after lung cancer and is associated with high mortality rates worldwide. Chalcones have attracted significant interest because of their diverse biological properties, including potential anticancer effects. In this study, five 3′,4′,5′-trimethoxychalcones (1-5) were tested against HCT-116 colon cancer cells using an MTT assay for the first time. Molecular docking was conducted to predict molecular interactions targeting three proteins (tubulin, EGFR, and CDK2). Among the five, four compounds (1, 3, 4, and 5) exhibited strong inhibitory activity against HCT-116 colon cells, with IC50 values < 10 µM. Compounds 1-5 showed potency as drug candidates based on the Lipinski rules and pharmacokinetic profiles using SwissADME and pkCSM online tools. Moreover, molecular docking was performed on compound 5 against three protein targets (tubulin, EGFR, CDK2) with binding affinities of-7.4,-7.3, and-8.5 kcal/mol, respectively, and showed major H-bond interactions. Therefore, these results suggest that compound 5 could be a potential inhibitor to be developed in future studies, both in vitro and in vivo, to understand its inhibition mechanism and efficacy. © 2025 The Author(s).

Affiliations

Organic Chemistry Division, Department of Chemistry, Faculty of Mathematics and Natural Sciences, Institut Teknologi Bandung, Jl. Ganesha 10, West Java, Bandung, 40132, Indonesia; Department of Pharmacology, Faculty of Medicine, Chulalongkorn University, Pathumwan, Bangkok, 10330, Thailand; Chemistry Study Program, Universitas Negeri Jakarta, Jalan Rawamangun Muka, Jakarta, 13220, Indonesia; Chemistry Study Program, Faculty of Mathematics and Natural Science Education, Universitas Pendidikan Indonesia, Jl. Dr. Setiabudi No 229, Bandung, 40154, Indonesia; Center of Excellence in Natural Products Chemistry, Department of Chemistry, Faculty of Science, Chulalongkorn University, Bangkok, 10330, Thailand

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